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A

AbstractGenericDaoImpl<T extends com.dnastack.bob.persistence.entity.BasicEntity<I>,I> - Class in com.dnastack.bob.persistence.impl
Default generic DAO implementation.
AbstractGenericDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 
addRelationship(Beacon, Beacon) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 

B

BeaconDaoImpl - Class in com.dnastack.bob.persistence.impl
Basic beacon DAO implementation..
BeaconDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
BeaconResponseDaoImpl - Class in com.dnastack.bob.persistence.impl
Basic DAO of beacon responses.
BeaconResponseDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.BeaconResponseDaoImpl
 

C

com.dnastack.bob.persistence.impl - package com.dnastack.bob.persistence.impl
 
countAll() - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 

D

DatasetDaoImpl - Class in com.dnastack.bob.persistence.impl
JPA-based implementation of dataset DAO.
DatasetDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.DatasetDaoImpl
 
DataUseDaoImpl - Class in com.dnastack.bob.persistence.impl
JPA-based implementation of data use DAO.
DataUseDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.DataUseDaoImpl
 
DataUseRequirementDaoImpl - Class in com.dnastack.bob.persistence.impl
JPA-based implementation of data use requirement DAO.
DataUseRequirementDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.DataUseRequirementDaoImpl
 
delete(I) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 

E

em - Variable in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 

F

findAll() - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 
findByAggregation(boolean) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
findById(I) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 
findByIdAndVisibility(String, boolean) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
findByIdAndVisibility(String, boolean) - Method in class com.dnastack.bob.persistence.impl.OrganizationDaoImpl
 
findByIds(Collection<String>) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
findByIds(Collection<String>) - Method in class com.dnastack.bob.persistence.impl.OrganizationDaoImpl
 
findByIdsAndVisibility(Collection<String>, boolean) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
findByIdsAndVisibility(Collection<String>, boolean) - Method in class com.dnastack.bob.persistence.impl.OrganizationDaoImpl
 
findByIp(String) - Method in class com.dnastack.bob.persistence.impl.UserDaoImpl
 
findByName(String) - Method in class com.dnastack.bob.persistence.impl.OrganizationDaoImpl
 
findByUserName(String) - Method in class com.dnastack.bob.persistence.impl.UserDaoImpl
 
findByVisibility(boolean) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
findByVisibility(boolean) - Method in class com.dnastack.bob.persistence.impl.OrganizationDaoImpl
 
findDescendants(Beacon, boolean, boolean, boolean, boolean) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 
flush() - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 

G

getReferenceById(I) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 
getResultList(TypedQuery<T>) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 
getSingleResult(TypedQuery<T>) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 

H

haveRelationship(Beacon, Beacon) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 

O

OrganizationDaoImpl - Class in com.dnastack.bob.persistence.impl
JPA-based implementation of organization DAO.
OrganizationDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.OrganizationDaoImpl
 

Q

QueryDaoImpl - Class in com.dnastack.bob.persistence.impl
Basic provider of queries.
QueryDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.QueryDaoImpl
 

R

removeRelationship(Beacon, Beacon) - Method in class com.dnastack.bob.persistence.impl.BeaconDaoImpl
 

S

save(T) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 

U

update(T) - Method in class com.dnastack.bob.persistence.impl.AbstractGenericDaoImpl
 
UserDaoImpl - Class in com.dnastack.bob.persistence.impl
JPA-based implementation of user DAO.
UserDaoImpl() - Constructor for class com.dnastack.bob.persistence.impl.UserDaoImpl
 
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