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A
AlleleResourceImpl
- Class in
com.dnastack.bob.rest.resource
Allele rest resource.
AlleleResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
AlleleResourceImpl
B
BeaconApplication
- Class in
com.dnastack.bob.rest.app
REST application.
BeaconApplication()
- Constructor for class com.dnastack.bob.rest.app.
BeaconApplication
BeaconDtoComparator
- Interface in
com.dnastack.bob.rest.comparator
Comparator of BeaconDto objects.
BeaconDtoIdComparator
- Class in
com.dnastack.bob.rest.comparator
Comparator of BeaconDto objects.
BeaconDtoIdComparator()
- Constructor for class com.dnastack.bob.rest.comparator.
BeaconDtoIdComparator
BeaconDtoNameComparator
- Class in
com.dnastack.bob.rest.comparator
Comparator of BeaconDto objects.
BeaconDtoNameComparator()
- Constructor for class com.dnastack.bob.rest.comparator.
BeaconDtoNameComparator
BeaconResourceImpl
- Class in
com.dnastack.bob.rest.resource
Query rest resource.
BeaconResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
BeaconResourceImpl
BeaconResponseDtoComparator
- Class in
com.dnastack.bob.rest.comparator
Comparator of BeaconResponseDto objects.
BeaconResponseDtoComparator()
- Constructor for class com.dnastack.bob.rest.comparator.
BeaconResponseDtoComparator
BeaconResponseResourceImpl
- Class in
com.dnastack.bob.rest.resource
Query rest resource.
BeaconResponseResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
BeaconResponseResourceImpl
C
ChromosomeResourceImpl
- Class in
com.dnastack.bob.rest.resource
Chromosome rest resource.
ChromosomeResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
ChromosomeResourceImpl
com.dnastack.bob.rest.app
- package com.dnastack.bob.rest.app
com.dnastack.bob.rest.comparator
- package com.dnastack.bob.rest.comparator
com.dnastack.bob.rest.resource
- package com.dnastack.bob.rest.resource
com.dnastack.bob.rest.util
- package com.dnastack.bob.rest.util
compare(BeaconDto, BeaconDto)
- Method in class com.dnastack.bob.rest.comparator.
BeaconDtoIdComparator
compare(BeaconDto, BeaconDto)
- Method in class com.dnastack.bob.rest.comparator.
BeaconDtoNameComparator
compare(BeaconResponseDto, BeaconResponseDto)
- Method in class com.dnastack.bob.rest.comparator.
BeaconResponseDtoComparator
compare(OrganizationDto, OrganizationDto)
- Method in class com.dnastack.bob.rest.comparator.
OrganizationDtoIdComparator
compare(OrganizationDto, OrganizationDto)
- Method in class com.dnastack.bob.rest.comparator.
OrganizationDtoNameComparator
create(UriInfo, BeaconDto)
- Method in class com.dnastack.bob.rest.resource.
BeaconResourceImpl
create(UriInfo, OrganizationDto)
- Method in class com.dnastack.bob.rest.resource.
OrganizationResourceImpl
D
delete(UriInfo, String)
- Method in class com.dnastack.bob.rest.resource.
BeaconResourceImpl
delete(UriInfo, String)
- Method in class com.dnastack.bob.rest.resource.
OrganizationResourceImpl
E
Error
- Class in
com.dnastack.bob.rest.util
Application error.
Error()
- Constructor for class com.dnastack.bob.rest.util.
Error
ExceptionHandler
- Class in
com.dnastack.bob.rest.util
Handler of DataAccessException hierarchy.
ExceptionHandler()
- Constructor for class com.dnastack.bob.rest.util.
ExceptionHandler
extractIpAddress(HttpServletRequest)
- Static method in class com.dnastack.bob.rest.util.
IpExtractor
Extracts client's IP address from HTTP headers.
F
filter(ContainerRequestContext)
- Method in class com.dnastack.bob.rest.util.
LoggingFilter
G
getClasses()
- Method in class com.dnastack.bob.rest.app.
BeaconApplication
getCollection()
- Method in class com.dnastack.bob.rest.util.
JaxbList
getMediaType(HttpHeaders)
- Static method in class com.dnastack.bob.rest.util.
MediaTypeResolver
Determines whether to use JSON (default) or XML.
getSingletons()
- Method in class com.dnastack.bob.rest.app.
BeaconApplication
getStatus(Exception)
- Static method in class com.dnastack.bob.rest.util.
ResponseStatusMapper
Retrieves Response.Status from a given exception according to the static mapping.
I
IdComparator
- Annotation Type in
com.dnastack.bob.rest.comparator
Comparator using IDs.
IpExtractor
- Class in
com.dnastack.bob.rest.util
IP address extractor.
J
JaxbList
<
T
> - Class in
com.dnastack.bob.rest.util
List wrapper used for serialization into XML.
JaxbList()
- Constructor for class com.dnastack.bob.rest.util.
JaxbList
JaxbList(List<T>)
- Constructor for class com.dnastack.bob.rest.util.
JaxbList
JaxbList(T[])
- Constructor for class com.dnastack.bob.rest.util.
JaxbList
L
LoggingFilter
- Class in
com.dnastack.bob.rest.util
Filter logging IP addresses requests coming to the REST API.
LoggingFilter()
- Constructor for class com.dnastack.bob.rest.util.
LoggingFilter
M
MediaTypeResolver
- Class in
com.dnastack.bob.rest.util
Utility determining the media type to use in a response.
N
NameComparator
- Annotation Type in
com.dnastack.bob.rest.comparator
Comparator using names.
O
OrganizationDtoComparator
- Interface in
com.dnastack.bob.rest.comparator
Comparator of OrganizationDto objects.
OrganizationDtoIdComparator
- Class in
com.dnastack.bob.rest.comparator
Comparator of OrganizationDto objects.
OrganizationDtoIdComparator()
- Constructor for class com.dnastack.bob.rest.comparator.
OrganizationDtoIdComparator
OrganizationDtoNameComparator
- Class in
com.dnastack.bob.rest.comparator
Comparator of OrganizationDto objects.
OrganizationDtoNameComparator()
- Constructor for class com.dnastack.bob.rest.comparator.
OrganizationDtoNameComparator
OrganizationResourceImpl
- Class in
com.dnastack.bob.rest.resource
Organization rest resource.
OrganizationResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
OrganizationResourceImpl
P
parameterHasMultipleValidValue(String)
- Static method in class com.dnastack.bob.rest.util.
ParameterParser
Checks if there are multiple values given as a parameter.
parameterHasSingleValidValue(String)
- Static method in class com.dnastack.bob.rest.util.
ParameterParser
Checks if there is a single value given for the specified parameter.
ParameterParser
- Class in
com.dnastack.bob.rest.util
Parsing utils for request parameters.
parseMultipleParameterValues(String)
- Static method in class com.dnastack.bob.rest.util.
ParameterParser
Extract multiple values of a single parameter using "," as a delimiter and "[]" as borders.
Q
query(String, String, Long, String, String)
- Method in class com.dnastack.bob.rest.resource.
BeaconResponseResourceImpl
queryBeacon(String, String, Long, String, String)
- Method in class com.dnastack.bob.rest.resource.
BeaconResponseResourceImpl
R
ReferenceResourceImpl
- Class in
com.dnastack.bob.rest.resource
Reference rest resource.
ReferenceResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
ReferenceResourceImpl
ResponseStatusMapper
- Class in
com.dnastack.bob.rest.util
Maps DAO exceptions to JAX-RS response codes.
RestEndPointResourceImpl
- Class in
com.dnastack.bob.rest.resource
Information/help rest resource.
RestEndPointResourceImpl()
- Constructor for class com.dnastack.bob.rest.resource.
RestEndPointResourceImpl
S
show(String)
- Method in class com.dnastack.bob.rest.resource.
BeaconResourceImpl
show(String)
- Method in class com.dnastack.bob.rest.resource.
OrganizationResourceImpl
showAll()
- Method in class com.dnastack.bob.rest.resource.
AlleleResourceImpl
showAll()
- Method in class com.dnastack.bob.rest.resource.
ChromosomeResourceImpl
showAll()
- Method in class com.dnastack.bob.rest.resource.
ReferenceResourceImpl
showBeacon(String)
- Method in class com.dnastack.bob.rest.resource.
BeaconResourceImpl
showEndPoints()
- Method in class com.dnastack.bob.rest.resource.
RestEndPointResourceImpl
showOrganization(String)
- Method in class com.dnastack.bob.rest.resource.
OrganizationResourceImpl
T
toResponse(Exception)
- Method in class com.dnastack.bob.rest.util.
ExceptionHandler
U
update(UriInfo, String, BeaconDto)
- Method in class com.dnastack.bob.rest.resource.
BeaconResourceImpl
update(UriInfo, String, OrganizationDto)
- Method in class com.dnastack.bob.rest.resource.
OrganizationResourceImpl
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DNAstack
. All rights reserved.